Sarribouette, L., Pedersen, N. E., Edwards, C. B., & Sandin, S. A. (2022). Post-settlement demographics of reef building corals suggest prolonged recruitment bottlenecks. Oecologia.
Runyan, H., Petrovic, V., Edwards, C. B., Pedersen, N., Alcantar, E., Kuester, F., & Sandin, S. A. (2022). Automated 2D, 2.5D, and 3D Segmentation of Coral Reef Pointclouds and Orthoprojections. Frontiers in Robotics and AI, 9, 884317.
Sandin, S. A., Alcantar, E., Clark, R., De Leon, R., Dilrosun, F., Edwards, C. B., Estep, A. J., Eynaud, Y., French, B. J., Fox, M. D., Grenda, D., Hamilton, S. L., Kramp, H., Marhaver, K. L., Miller, S. D., Roach, T. N. F., Seferina, G., Silveira, C. B., Smith, J. E., … Vermeij, M. J. A. (2022). Benthic assemblages are more predictable than fish assemblages at an island scale. Coral Reefs.
Bonito, L., Bellquist, L., Jackson, A. M., Kauer, K., Gleason, M. G., Wilson, J., & Sandin, S. (2022). US exempted fishing permits: Role, value, and lessons learned for adaptive fisheries management. Marine Policy, 138, 9.
Williams, M. A., Faiad, S., Claar, D. C., French, B., Leslie, K. L., Oven, E., Guerra, A. S., Micheli, F., Zgliczynski, B. J., Haupt, A. J., Sandin, S. A., & Wood, C. L. (2022). Life history mediates the association between parasite abundance and geographic features. Journal of Animal Ecology, 14.
Sandin, S. A., French, B. J., & Zgliczynski, B. J. (2022). Emerging insights on effects of sharks and other top predators on coral reefs. Emerging Topics in Life Sciences.
Ma, L., Becker, C., Weber, L., Sullivan, C., Zgliczynski, B., Sandin, S., Brandt, M., Smith, T. B., & Apprill, A. (2022). Biogeography of reef water microbes from within-reef to global scales. Aquatic Microbial Ecology, 88, 81–94.
Leliaert, F., Kelly, E. L. A., Janouskovec, J., Fox, M. D., Johnson, M. D., Redfern, F. M., Eria, T., Haas, A. F., Sala, E., Sandin, S. A., & Smith, J. E. (2022). Brilliantia kiribatiensis, a new genus and species of Cladophorales (Chlorophyta) from the remote coral reefs of the Southern Line Islands, Pacific Ocean. Journal of Phycology, 15.
Pavoni, G., Corsini, M., Ponchio, F., Muntoni, A., Edwards, C., Pedersen, N., Sandin, S., & Cignoni, P. (2021). TagLab: AI-assisted annotation for the fast and accurate semantic segmentation of coral reef orthoimages. Journal of Field Robotics, 17.
Fox, M. D., Cohen, A. L., Rotjan, R. D., Mangubhai, S., Sandin, S. A., Smith, J. E., Thorrold, S. R., Dissly, L., Mollica, N. R., & Obura, D. (2021). Increasing coral reef resilience through successive marine heatwaves. Geophysical Research Letters, 48(17), 11.
Akiona, A. K., Zgliczynski, B. J., & Sandin, S. A. (2021). Length-weight relationships for 18 coral reef fish species from the central Pacific. Journal of Applied Ichthyology.
Sandin, S. A., Eynaud, Y., Williams, G. J., Edwards, C. B., & McNamara, D. E. (2020). Modelling the linkage between coral assemblage structure and pattern of environmental forcing. Royal Society Open Science, 7(10).
Ben-Aderet, N., Johnston, E. M., Cravey, R., & Sandin, S. A. (2020). Revisiting the life history of yellowtail jack (Seriola dorsalis) in the Southern California Bight: new evidence for ontogenetic habitat shifts and regional differences in a changing environment. Fishery Bulletin, 118(2), 157–170.
Kodera, S. M., Edwards, C. B., Petrovic, V., Pedersen, N. E., Eynaud, Y., & Sandin, S. A. (2020). Quantifying life history demographics of the scleractinian coral genus Pocillopora at Palmyra Atoll. Coral Reefs.
French, B. J., Lim, Y. W., Zgliczynski, B. J., Edwards, R. A., Rohwer, F., & Sandin, S. A. (2020). Decoding diversity in a coral reef fish species complex with restricted range using metagenomic sequencing of gut contents. Ecology and Evolution, 10(7), 3413–3423.
Johnson, M. D., Fox, M. D., Kelly, E. L. A., Zgliczynski, B. J., Sandin, S. A., & Smith, J. E. (2020). Ecophysiology of coral reef primary producers across an upwelling gradient in the tropical central Pacific. PLOS ONE, 15(2), e0228448.
Carter, A. L., Edwards, C. B., Fox, M. D., Amir, C. G., Eynaud, Y., Johnson, M. D., Lewis, L. S., Sandin, S. A., & Smith, J. E. (2019). Changes in benthic community composition associated with the outbreak of the corallimorph, Rhodactis howesii, at Palmyra Atoll. Coral Reefs, 38(6), 1267–1279.
Brito-Millán, M., Vermeij, M. J. A., Alcantar, E. A., & Sandin, S. A. (2019). Coral reef assessments based on cover alone mask active dynamics of coral communities. Marine Ecology Progress Series, 630, 55–68.
Pedersen, N. E., Edwards, C. B., Eynaud, Y., Gleason, A. C. R., Smith, J. E., & Sandin, S. A. (2019). The influence of habitat and adults on the spatial distribution of juvenile corals. Ecography.
Zgliczynski, B. J., Williams, G. J., Hamilton, S. L., Cordner, E. G., Fox, M. D., Eynaud, Y., Michener, R. H., Kaufman, L. S., & Sandin, S. A. (2019). Foraging consistency of coral reef fishes across environmental gradients in the central Pacific. Oecologia, 191(2), 433–445.
Fox, M. D., Carter, A. L., Edwards, C. B., Takeshita, Y., Johnson, M. D., Petrovic, V., Amir, C. G., Sala, E., Sandin, S. A., & Smith, J. E. (2019). Limited coral mortality following acute thermal stress and widespread bleaching on Palmyra Atoll, central Pacific. Coral Reefs, 38(4), 701–712.
Miller, S. D., Zgliczynski, B. J., Fox, M. D., Kaufman, L. S., Michener, R. H., Sandin, S. A., & Hamilton, S. L. (2019). Niche width expansion of coral reef fishes along a primary production gradient in the remote central Pacific. Marine Ecology Progress Series, 625, 127–143.
Kelly, L. W., Nelson, C. E., Haas, A. F., Naliboff, D. S., Calhoun, S., Carlson, C. A., Edwards, R. A., Fox, M. D., Hatay, M., Johnson, M. D., Kelly, E. L. A., Lim, Y. W., Macherla, S., Quinlan, Z. A., Silva, G. G. Z., Vermeij, M. J. A., Zgliczynski, B., Sandin, S. A., Smith, J. E., & Rohwer, F. (2019). Diel population and functional synchrony of microbial communities on coral reefs. Nature Communications, 10.
McNamara, D. E., Cortale, N., Edwards, C., Eynaud, Y., & Sandin, S. A. (2019). Insights into coral reef benthic dynamics from nonlinear spatial forecasting. Journal of the Royal Society Interface, 16(153).
Brito-Millán, M., Werner, B. T., Sandin, S. A., & McNamara, D. E. (2019). Influence of aggregation on benthic coral reef spatio-temporal dynamics. Royal Society Open Science, 6(2), 181703.
Fox, M. D., Williams, G. J., Johnson, M. D., Radice, V. Z., Zgliczynski, B. J., Kelly, E. L. A., Rohwer, F. L., Sandin, S. A., & Smith, J. E. (2018). Gradients in primary production predict trophic strategies of mixotrophic corals across spatial scales. Current Biology, 28(21), 3355-+.
Wood, C. L., Zgliczynski, B. J., Haupt, A. J., Guerra, A. S., Micheli, F., & Sandin, S. A. (2018). Human impacts decouple a fundamental ecological relationship-The positive association between host diversity and parasite diversity. Global Change Biology, 24(8), 3666–3679.
Cinner, J. E., Maire, E., Huchery, C., MacNeil, M. A., Graham, N. A. J., Mora, C., Barnes, M. L., Kittinger, J. N., Hicks, C. C., D’Agata, S., Hoey, A. S., Gurney, G. G., Feary, D. A., Williams, I. D., Kulbicki, M., Vigliola, L., Wantiez, L., Edgar, G. J., Stuart-Smith, R. D., … Mouillot, D. (2018). Gravity of human impacts mediates coral reef conservation gains. Proceedings of the National Academy of Sciences of the United States of America, 115(27), E6116–E6125.
Nakajima, R., Haas, A. F., Silveira, C. B., Kelly, E. L. A., Smith, J. E., Sandin, S., Kelly, L. W., Rohwer, F., Nakatomi, N., & Kurihara, H. (2018). Release of dissolved and particulate organic matter by the soft coral Lobophytum and subsequent microbial degradation. Journal of Experimental Marine Biology and Ecology, 504, 53–60.
Maire, E., Villeger, S., Graham, N. A. J., Hoey, A. S., Cinner, J., Ferse, S. C. A., Aliaume, C., Booth, D. J., Feary, D. A., Kulbicki, M., Sandin, S. A., Vigliola, L., & Mouillot, D. (2018). Community-wide scan identifies fish species associated with coral reef services across the Indo-Pacific. Proceedings of the Royal Society B-Biological Sciences, 285(1883).
Williams, G. J., Sandin, S. A., Zgliczynski, B. J., Fox, M. D., Gove, J. M., Rogers, J. S., Furby, K. A., Hartmann, A. C., Caldwell, Z. R., Price, N. N., & Smith, J. E. (2018). Biophysical drivers of coral trophic depth zonation. Marine Biology, 165(4).
McCauley, D. J., Gellner, G., Martinez, N. D., Williams, R. J., Sandin, S. A., Micheli, F., Mumby, P. J., & McCann, K. S. (2018). On the prevalence and dynamics of inverted trophic pyramids and otherwise top-heavy communities. Ecology Letters, 21(3), 439–454.
Ruttenberg, B., Caselle, J. E., Estep, A. J., Johnson, A. E., Marhaver, K. L., Richter, L. J., Sandin, S. A., Vermeij, M. J. A., Smith, J. E., Grenda, D., & Cannon, A. (2018). Ecological assessment of the marine ecosystems of Barbuda, West Indies: Using rapid scientific assessment to inform ocean zoning and fisheries management. PLOS ONE, 13(1).
Edwards, C. B., Eynaud, Y., Williams, G. J., Pedersen, N. E., Zgliczynski, B. J., Gleason, A. C. R., Smith, J. E., & Sandin, S. A. (2017). Large-area imaging reveals biologically driven non-random spatial patterns of corals at a remote reef. Coral Reefs, 36(4), 1291–1305.
Nicklisch, S. C. T., Bonito, L. T., Sandin, S., & Hamdoun, A. (2017). Mercury levels of yellowfin tuna (Thunnus albacares) are associated with capture location. Environmental Pollution, 229, 87–93.
Kelly, E. L. A., Eynaud, Y., Williams, I. D., Sparks, R. T., Dailer, M. L., Sandin, S. A., & Smith, J. E. (2017). A budget of algal production and consumption by herbivorous fish in an herbivore fisheries management area, Maui, Hawaii. Ecosphere, 8(8).
Knowles, B., Bailey, B., Boling, L., Breitbart, M., Cobian-Guemes, A., del Campo, J., Edwards, R., Felts, B., Grasis, J., Haas, A. F., Katira, P., Kelly, L. W., Luque, A., Nulton, J., Paul, L., Peters, G., Robinett, N., Sandin, S., Segall, A., … Rohwer, F. (2017). Variability and host density independence in inductions-based estimates of environmental lysogeny. Nature Microbiology, 2(7).
Nicklisch, S. C. T., Bonito, L. T., Sandin, S., & Hamdoun, A. (2017). Geographic differences in persistent organic pollutant levels of yellowfin tuna. Environ Health Perspect, 125(6), 067014.
Furby, K. A., Smith, J. E., & Sandin, S. A. (2017). Porites superfusa mortality and recovery from a bleaching event at Palmyra Atoll USA. PeerJ, 5.
Zgliczynski, B. J., & Sandin, S. A. (2017). Size-structural shifts reveal intensity of exploitation in coral reef fisheries. Ecological Indicators, 73, 411–421.
Cinner, J. E., Huchery, C., MacNeil, M. A., Graham, N. A. J., McClanahan, T. R., Maina, J., Maire, E., Kittinger, J. N., Hicks, C. C., Mora, C., Allison, E. H., D’Agata, S., Hoey, A., Feary, D. A., Crowder, L., Williams, I. D., Kulbicki, M., Vigliola, L., Wantiez, L., … Mouillot, D. (2016). Bright spots among the world’s coral reefs. Nature, 535(7612), 416–419.
Eynaud, Y., McNamara, D. E., & Sandin, S. A. (2016). Herbivore space use influences coral reef recovery. Royal Society Open Science, 3(6).
Haas, A. F., Fairoz, M. F. M., Kelly, L. W., Nelson, C. E., Dinsdale, E. A., Edwards, R. A., Giles, S., Hatay, M., Hisakawa, N., Knowles, B., Lim, Y. W., Maughan, H., Pantos, O., Roach, T. N. F., Sanchez, S. E., Silveira, C. B., Sandin, S., Smith, J. E., & Rohwer, F. (2016). Global microbialization of coral reefs. Nature Microbiology, 1(6).
Caldwell, Z. R., Zgliczynski, B. J., Williams, G. J., & Sandin, S. A. (2016). Reef fish survey techniques: Assessing the potential for standardizing methodologies. PLOS ONE, 11(4).
Quinn, R. A., Vermeij, M. J. A., Hartmann, A. C., d’Auriac, I. G., Benler, S., Haas, A., Quistad, S. D., Lim, Y. W., Little, M., Sandin, S., Smith, J. E., Dorrestein, P. C., & Rohwer, F. (2016). Metabolomics of reef benthic interactions reveals a bioactive lipid involved in coral defence. Proceedings of the Royal Society B-Biological Sciences, 283(1829).
Nicklisch, S. C. T., Rees, S. D., McGrath, A. P., Gökirmak, T., Bonito, L. T., Vermeer, L. M., Cregger, C., Loewen, G., Sandin, S., Chang, G., & Hamdoun, A. (2016). Global marine pollutants inhibit P-glycoprotein: Environmental levels, inhibitory effects, and cocrystal structure. Science Advances, 2(4).
Knowles, B., Silveira, C. B., Bailey, B. A., Barott, K., Cantu, V. A., Cobian-Guemes, A. G., Coutinho, F. H., Dinsdale, E. A., Felts, B., Furby, K. A., George, E. E., Green, K. T., Gregoracci, G. B., Haas, A. F., Haggerty, J. M., Hester, E. R., Hisakawa, N., Kelly, L. W., Lim, Y. W., … Rohwer, F. (2016). Lytic to temperate switching of viral communities. Nature, 531(7595), 466-+.
Smith, J. E., Brainard, R., Carter, A., Grillo, S., Edwards, C., Harris, J., Lewis, L., Obura, D., Rohwer, F., Sala, E., Vroom, P. S., & Sandin, S. (2016). Re-evaluating the health of coral reef communities: baselines and evidence for human impacts across the central Pacific. Proceedings of the Royal Society B-Biological Sciences, 283(1822).
Bonito, L. T., Hamdoun, A., & Sandin, S. A. (2016). Evaluation of the global impacts of mitigation on persistent, bioaccumulative and toxic pollutants in marine fish. PeerJ, 4.
Haas, A. F., Guibert, M., Foerschner, A., Co, T., Calhoun, S., George, E., Hatay, M., Dinsdale, E., Sandin, S. A., Smith, J. E., Vermeij, M. J. A., Felts, B., Dustan, P., Salamon, P., & Rohwer, F. (2015). Can we measure beauty? Computational evaluation of coral reef aesthetics. PeerJ, 3.